| 1 |
Introduction and Biological Databases |
|
| 2 |
Rapid Database Search (Hashing) |
|
| 3 |
Regulatory Motif Discovery (Combinatorial Search) |
Assignment 1 out |
| 4 |
Probabilistic Motif Finding (Gibbs Sampling) |
|
| 5 |
Sequence Alignment (Dynamic Programming) |
Assignment 1 due |
| 6 |
Markov Chains and Hidden Markov Models |
|
| 7 |
Gene Finding |
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| 8 |
Genome Evolution and Phylogenetic Trees |
Assignment 2 out |
| 9 |
Genome Duplication |
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| 10 |
Gene Expression Clustering |
|
| 11-12 |
Gene Network and Inference |
Assignment 2 due |
| 13 |
Scale-free Networks |
Assignment 3 due |
| 14 |
Comparative Genomics |
Assignment 4 due |
